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MICROARRAY SAMPLE TABLE:
SAMPLE_IDPATIENT_IDCHIPTYPELOTNUMBERTISSUE_IDPERCPRESQUALITYSFACTORRAWQSCOREGAPDH35RATIOACTIN35RATIOSAMPLECOMMENTSAMPLE_DATE
11U1332000268B126.92OK5.5321.7601.8312.206NONE2001-11-16
22U1332000268B129.50OK6.1441.5102.6935.772NONE2001-11-20
35U1332000268B131.03OK4.8361.5802.0812.592NONE2001-12-19
510U1332001004B134.06OK2.1101.9801.6312.713NONE2002-03-07
1017U1332002897B121.59OK13.5622.0201.6181.700NONE0000-00-00
1119U1332002897B118.29PROBLEM:PP,OUT19.2941.8401.9623.968NONE2002-06-14
1218U1332002897B119.43OK17.4731.8502.3512.664Right Lung Sample2002-06-12
1422U1332002897B117.11PROBLEM:PP,OUT18.4571.9401.3701.544NONE0000-00-00
1526U1332004076B117.15PROBLEM:PP,OUT13.5312.3905.0556.305Poor 3'5' ratios but kept in analysis2002-08-26
1630U1332004076B115.21PROBLEM:PP,OUT11.5662.7409.0966.524Poor 3'5' ratios but kept in analysis2002-08-26
1834U1332003814B125.93OK7.4722.4102.4872.910NONE2002-08-24
1941U133B14.83PROBLEM9.1821.9802.0682.201Poor 3'5' ratios2002-09-04
2752U133B122.00OK11.0202.1506.1507.060NONE2002-10-03
2853U133B128.46OK7.6102.0702.5603.450NONE2002-10-03
2956U133B122.84OK13.8001.7504.52010.700NONE2002-10-04
3261U133B13.51PROBLEM:OUT38.3002.2406.07022.700high scaling factor2011-02-02
3362U133B14.08PROBLEM40.6001.9705.2804.810high scaling factor2011-02-02
3463U133B128.90OK7.2402.2504.6006.230NONE0000-00-00
3666U133B129.53OK9.4101.7402.0302.690NONE2002-11-20
3767U133B119.58OK18.4401.7004.8108.430High scaling factor2002-11-20
3873U133B124.41OK12.9401.8402.1802.000NONE2002-12-20
3976U133B123.53OK12.0601.9402.0103.510NONE2002-12-20
4077U133B127.01OK10.4301.7801.2401.420NONE2002-12-20
4178U133B128.82OK8.0601.9902.5104.720NONE2002-12-20
4288U133B133.16OK5.6301.9101.7202.240NONE2002-12-19
4390U133B121.71OK9.6402.1501.7109.860NONE2002-12-23
4491U133B126.25OK7.6802.1604.1506.390NONE2002-12-23
4594U133B129.05OK6.8402.2001.2301.770NONE2003-01-31
4695U133B132.25OK6.7901.8303.6909.980Small grid misalignment2003-01-31
4797U133B134.22OK5.0802.0001.7201.920NONE2003-01-31
4898U133B127.14OK8.8601.9902.9804.310Right Lung Sample2003-01-31
4998U133B124.65REPLICATE: SPATIAL11.0301.8204.4209.160Left Lung Sample2003-01-31
51100U1332006581B18.45PROBLEM: PP,OUT,GAPDH37.0201.74037.0205.650High scaling factor, poor 3'5' ratio2003-02-25
52101U1332006581B121.40OK12.1001.7708.5005.310NONE2003-02-25
53102U1332006581B115.08PROBLEM: PP,OUT,GAPDH20.5301.78025.83013.670High Scaling Factor and High GADPH Ratio2003-02-25
54103U1332006581B119.73OK12.1601.8104.7101.480NONE2003-02-25
5518U1332002897B112.84REPLICATE: SPATIAL25.5001.8801.9402.260Left Lung Sample2002-07-02
56112U1332006581B134.05OK1.5043.1701.3442.085NONE2003-04-07
58114U1332006581B141.53OK0.9703.2901.4433.006OK2003-04-07
59115U1333000410B141.88OK1.3102.9803.1707.770NONE2003-04-04
60116U1333000410B143.88OK1.0003.1902.2905.570NONE2003-04-04
61108U1332006581B134.75OK2.2802.4906.16014.490NONE2003-04-10
6378U1332006581B137.14REPLICATE: 3 MONTH2.0902.7306.54017.200OK2003-04-07
64112U1332006581B139.08REPLICATE: TECHNICAL1.6402.8401.8102.980BUBBLE ON CHIP2003-04-04
65114U1332006581B139.79REPLICATE: TECHNICAL1.3802.6801.5202.520BUBBLE ON CHIP2003-04-04
66114U1332006581B141.01REPLICATE: TECHNICAL1.5102.8701.6402.340TRIPLICATE OF PATIENT 1142003-05-06
67117U1332006581B140.62OK1.7002.5804.2009.520NONE2003-05-06
68118U1332006581B140.72OK1.3802.7401.8004.080NONE2003-05-06
69119U1332006581B128.68OK2.6202.8401.9304.600NONE2003-05-06
70120U1332006581B140.99OK1.4502.4801.9603.470NONE2003-05-06
71121U1332006581B142.22OK1.0802.7001.6202.680NONE2003-05-06
72122U1332006581B142.68OK1.1102.7901.7803.280NONE2003-05-06
73123U1332006581B135.27OK1.9502.7102.4304.330NONE2003-05-06
74124U1332006581B14.55PROBLEM:OUT,PP35.0202.1102.7304.230NONE2003-05-14
75125U1332006581B132.78OK2.6802.4501.8404.800NONE2003-05-14
76126U1332006581B128.50OK3.9102.1603.7109.430NONE2003-05-14
77127U1332006581B133.56OK2.2402.6001.5102.530NONE2003-05-14
78128U1332006581B133.03OK2.4502.7203.38011.790NONE2003-05-14
79129U1332006581B133.99OK2.6002.3403.32015.150NONE2003-05-14
80130U1332006581B125.69PROBLEM: GAPDH3.5302.80028.52047.630high GAPDH and ACTIN ratios2003-05-16
81131U1332006581B143.69OK0.9502.7802.3905.190NONE2003-05-16
82132U1332006581B140.98OK1.1502.7303.6709.260NONE2003-05-16
83133U1332006581B143.35OK0.8802.7501.3502.030NONE2003-05-16
84134U1332006581B133.50OK2.0702.78012.02027.980NONE2003-05-16
85102U1332006581B138.54OK1.3403.1204.87011.650NONE2003-05-30
86103U1332006581B137.07REPLICATE: 3 MONTH1.3303.3901.4302.330NONE2003-05-30
87136U1332006581B131.74OK2.5702.7305.74013.090NONE2003-05-30
88137U1332006581B136.85OK1.5902.9202.9005.810NONE2003-05-30
89138U1332006581B137.60OK1.9902.7003.5806.250NONE2003-05-30
90139U1332006581B137.43PROBLEM: CIGAR1.8102.8902.4405.460NONE2003-05-30
91140U1332006581B140.56OK1.0804.4402.6503.960NONE2003-06-06
92141U1332006581B141.53OK1.0003.3801.8203.200NONE2003-06-06
93142U1332006581B128.59OK2.5002.8706.82011.740NONE2003-06-06
94143U1332006581B136.18OK1.6003.4202.2203.440NONE2003-06-06
96145U1332006581B138.86OK1.0603.9401.5902.310NONE2003-06-06
97146U1333001756B139.60OK1.3503.7602.0903.370NONE2003-06-13
98147U1333001756B132.68OK1.8503.48011.85017.650high GAPDH and ACTIN ratios2003-06-13
99148U1333001756B142.58OK1.0603.1802.1303.200NONE2003-06-19
100149U1333001756B133.34OK2.1002.8208.70017.310NONE2003-06-13
101150U1333001756B119.77PROBLEM: GAPDH,PP4.3703.23026.58035.500high GAPDH and ACTIN ratios2003-06-13
102151U1333001756B138.15OK1.5803.1206.02010.370NONE2003-06-13
103152U1333001756B129.47OK2.4303.00022.60021.530high GAPDH and ACTIN ratios2003-06-19
104153U1333001756B135.02OK2.0202.89010.15020.810high GAPDH and ACTIN ratios2003-06-19
105154U1333001756B131.63OK2.2503.40023.71046.550high GAPDH and ACTIN ratios2003-06-19
106155U1333001756B142.89OK0.9702.9702.9507.320NONE2003-06-19
107156U1333001756B139.38OK1.3103.1905.14013.230NONE2003-06-19
108157U1333001756B137.50OK2.0603.0201.6704.070NONE2003-06-27
109158U1333001756B137.56OK1.9802.3803.1007.980NONE2003-06-27
110159U1333001756B135.73OK2.3402.4605.4606.040NONE2003-06-27
112161U1333001756B135.30OK2.1902.9402.0503.090NONE2003-06-27
113162U1333001756B141.44OK1.2503.6802.2503.880NONE2003-06-27
116165U1333001756B137.40OK2.0422.7301.4702.500NONE2003-07-15
118167U1333001756B136.70OK1.8673.5701.5603.310NONE2003-07-15
120169U1333001756B135.80OK1.9723.2803.9109.790NONE2003-07-31
121170U1333001756B116.00PROBLEM: PP, OUT, GAPDH9.1802.31024.18022.180PROBLEM: low PP, high GAPDH and ACTIN ratios2003-07-31
124173U1333001756B133.00OK3.0793.0801.8405.700NONE2003-08-12
125174U1333001756B129.50OK3.5843.0905.30010.990NONE2003-08-12
127179U1333001756B132.70OK2.2292.4401.5502.470NONE2003-09-05
128180U1333001756B126.50OK4.9512.4408.34029.940high GAPDH and Actin ratios2003-09-05
131184U1333001756B129.40OK3.3032.5801.6602.030NONE2003-09-05
132185U1333001756B139.70OK2.3812.4201.5302.380NONE2003-10-08
134187U1333001756B142.80OK1.6932.5301.1902.010NONE2003-10-08
136193U1333001756B139.90OK2.7022.4101.7403.810NONE2003-11-20
140197U1333001756B135.10OK3.3902.3203.45012.010NONE2003-12-16
141198U1333001756B141.60OK2.2142.3502.2904.990NONE2003-12-16
143202U1333001756B128.10OK6.3161.6104.1505.770NONE2004-01-20
147207U1333001756B135.60OK3.4221.7003.1804.670NONE2004-01-20
149208U1333004640B145.50OK0.7652.5402.0302.940NONE2004-02-20
151215U1333004640B149.10OK0.6992.0001.3402.770NONE2004-03-01
153217U1333001274B111.60PROBLEM7.1362.0102.1405.910low present%2004-03-10
157234U1333001274B129.00OK4.2821.52023.84044.440NONE2004-04-01
158237U1333001274B150.10OK0.8391.7901.6003.640NONE2004-04-01
160239U1333001274B147.40OK0.7662.0401.2101.750NONE2004-04-16
161231U1333001274B146.00OK1.1342.0201.4902.110NONE2004-04-27
162242U1333001274B148.90OK0.9861.8102.5406.580NONE2004-04-27
164245U1333001274B145.90OK1.3601.6702.6403.860NONE2004-04-27
165246U1333001274B147.00OK1.1731.7701.8502.420NONE2004-04-27
169250U1333001274B146.80OK0.8202.4502.1804.930NONE2004-05-05
170251U1333001274B18.80PROBLEM7.9092.2802.7707.740NONE2004-05-05
172254U1333001724B145.70OK0.6803.3801.6002.690NONE2004-06-09
173255U1333001724B144.80OK0.6733.1301.3001.970NONE2004-06-09
176261U1333001724B147.40OK0.3863.6701.2802.420NONE2004-06-09
194281U1334002306B143.30OK1.1772.0601.1601.080NONE2004-08-20
217287U1334002306B142.60OK1.6271.8102.6104.810NONE2004-09-30
227320U1334004100B142.50OK1.1452.2501.4501.120NONE2004-12-23
245354U1334007109B131.40OK2.3072.5301.1801.440NONE2005-03-08
256363U1334007109B120.00OK4.6821.2703.6509.930NONE2005-03-24
259369U1334007109B137.40OK3.1692.5107.66014.950Bronch369, 4 brushes in Trizol, Affy's kit, starti2005-04-05